Publications

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International Journals

International Conferences

Technical Reports

List of publications at DBLP

List of papers at Google Scholar

Papers at Prague Stringology Conference




Refereed International Conferences

[34]

Fast Packed String Matching for Short Patterns

Proceedings of the International Meeting on Algorithm Engineering and Experiments (ALENEX13), pp.113-121
By Simone Faro and Oguzhan Kulekci
Published in 2013

[33]

Fast Searching in Biological Sequences Using Multiple Hash Functions

Proceedings of the 12th IEEE International Conference on BioInformatics and BioEngineering (BIBE), pp. 175-180
By Simone Faro and Thierry Lecroq
Published in 2012

[32]

Fast Multiple String Matching Using Streaming SIMD Extensions Technology

Proceedings of the 19th International Symposium on String Processing and Information Retrieval (SPIRE), Lecture Notes in Computer Science, 2012, Volume 7608, pp. 217-228
By Simone Faro and Oguzhan Kulekci
Published in 2012

[31]

A Fast Suffix Automata Based Algorithm for Exact Online String Matching

Proceedings of the 17th International Conference on Implementation and Application of Automata (CIAA), Lecture Notes in Computer Science, 2012, Volume 7381, pp. 149-158
By Simone Faro and Thierry Lecroq
Published in 2012

[30]

A Multiple Sliding Windows Approach to Speed Up String Matching Algorithms

Proceedings of the 11-th International Symposium on Experimental Algorithms (SEA), Lecture Notes in Computer Science, 2012, Volume 7276/2012, pp.172-183
By Simone Faro and Thierry Lecroq
Published in 2012

[29]

2001–2010: Ten Years of Exact String Matching Algorithms

Proceedings of the Prague Stringology Conference 2011, PSC 2011, pp.1-2
By Simone Faro and Thierry Lecroq
Published in 2011

[28]

Efficient Matching of Biological Sequences Allowing for Non-Overlapping Inversions

In Proceedings of the 22nd Annual Symposium on Combinatorial Pattern Matching, CPM 2011, Lecture Notes in Computer Science, 2011, Volume 6661/2011, pp.364-375
By Domenico Cantone, Salvatore Cristofaro and Simone Faro
Published in 2011

[27]

Approximate String Matching Allowing for Inversions and Translocations

In J.Holub and J.Zdarek (Eds.), Proceedings of the Prague Stringology Conference 2010, PSC 2010, pp.37-51
By Domenico Cantone, Simone Faro and Emanuele Giaquinta
Published in 2010

[26]

A Space-Efficient Implementation of the Good-Suffix Heuristic

In J.Holub and J.Zdarek (Eds.), Proceedings of the Prague Stringology Conference 2010, PSC 2010, pp.63-75
By Domenico Cantone and Simone Faro
Published in 2010

[25]

A Compact Representation of Nondeterministic (Suffix) Automata for the Bit-Parallel Approach

In Proceedings of the 21st Annual Symposium on Combinatorial Pattern Matching, CPM 2010, Lecture Notes in Computer Science, 2010, Volume 6129/2010, pp. 288-298
By Domenico Cantone, Simone Faro and Emanuele Giaquinta
Published in 2010

[24]

Bit-(Parallelism)^2: Getting to the Next Level of Parallelism

In Proceedings of the Fifth International Conference on Fun With Algorithms, FUN 2010, Lecture Notes in Computer Science, 2010, Volume 6099/2010, pp.166-177
By Domenico Cantone, Simone Faro and Emanuele Giaquinta
Published in 2010

[23]

Ant-CSP: an Ant Colony Optimization Algorithm for the Closest String Problem

In Proceedings of the 36th International Conference on Current Trends in Theory and Practice of Computer Science (SOFSEM 2010), Lecture Notes in Computer Science, Vol.5901 Springer Berlin, pp.370-381
By Simone Faro and Elisa Pappalardo
Published in 2010

[22]

Efficient Pattern Matching on Binary Strings

In Proceedings of the 35th International Conference on Current Trends in Theory and Practice of Computer Science (SOFSEM 2009), January 24-30, 2009, Hotel Arnika, Spindleruv Mlyn, Czech Republic
By Simone Faro and Thierry Lecroq
Published in 2009

[21]

Pattern Matching with Swaps for Short Patterns in Linear Time

In Proceedings of the 35th International Conference on Current Trends in Theory and Practice of Computer Science (SOFSEM 2009). January 24-30, 2009, Hotel Arnika, Spindleruv Mlyn, Czech Republic. Lecture Notes In Computer Science, Vol. 5404, Springer Berlin, pp.255-266
By Domenico Cantone and Simone Faro
Published in 2009

[20]

A Faster Algorithm for the Single Source Shortest Path Problem in the Presence of Few Sources or Destinations of Negative Arcs

In Proceedings of the 35th International Conference on Current Trends in Theory and Practice of Computer Science (SOFSEM 2009). January 24-30, 2009, Hotel Arnika, Spindleruv Mlyn, Czech Republic
By Domenico Cantone and Simone Faro
Published in 2009

[19]

An efficient matching algorithm for encoded DNA sequences and binary strings

In Proceedings of the 20th Annual Symposium on Combinatorial Pattern Matching (CPM 2009). Lecture Notes In Computer Science, Vol. 5577, Springer-Verlag, pp.106-115
By Simone Faro and Thierry Lecroq
Published in 2009

[18]

A New Algorithm for Efficient Pattern Matching with Swaps

In Proceedings of the 20th International Workshop on Combinatorial Algorithms (IWOCA 2009). Lecture Notes In Computer Science, Vol. 5874, Springer-Verlag, pp.230-241
By Matteo Campanelli, Domenico Cantone and Simone Faro
Published in 2009

[17]

An Efficient Algorithm for Approximate Pattern Matching with Swaps

In J.Holub and J.Zdarek (Eds.), Proceedings of the 14th Prague Stringology Conference (PSC 2009), Prague, Czech Republic, pp. 90-104
By Matteo Campanelli, Domenico Cantone, Simone Faro and Emanuele Giaquinta
Published in 2009

[16]

Adapting Boyer-Moore-Like Algorithms for Searching Huffman Encoded Texts

In J.Holub and J.Zdarek (Eds.), Proceedings of the 14th Prague Stringology Conference (PSC 2009), Prague, Czech Republic, pp. 29-39
By Domenico Cantone, Simone Faro and Emanuele Giaquinta
Published in 2009

[15]

Efficient Variants of the Backward-Oracle-Matching Algorithm

In J. Zdarek and J. Holub (Eds.), Proceedings of the 13th Prague Stringology Conference (PSC 2008), Prague, Czech Republic, September 2008, pp. 146-160
By Simone Faro and Thierry Lecroq
Published in 2008

[14]

New Efficient Bit-Parallel Algorithms for the Delta-Matching Problem with Alpha-Bounded Gaps

In J. Zdarek and J. Holub (Eds.), Proceedings of the 13th Prague Stringology Conference (PSC 2008), Prague, Czech Republic, September 2008, pp. 170-184
By Domenico Cantone, Salvatore Cristofaro and Simone Faro
Published in 2008

[13]

Finite State Models for the Generation of Large Corpora of Natural Language Texts

In Proceedings of the Seventh International Workshop on Finite-State Methods and Natural Language Processing (FSMNLP 2008), Ispra, Lago Maggiore
By Simone Faro, Domenico Cantone, Salvatore Cristofaro, Emanuele Giaquinta
Published in 2008

[12]

Pattern Matching for Control Chart Monitoring

In Progress in Industrial Mathematics at ECMI 2006, Mathematics in Industry, Volume 12, Springer Berlin Heidelberg, pp. 918-922
By Domenico Cantone and Simone Faro
Published in 2007

[11]

On some Combinatorial Problems concerning the Harmonic Structure of Musical Chord Sequences

In M. Simanek and J. Holub (Eds.), Proc. Of the Prague Stringology Conference '06, Czech Technical University, Prague, Czech Republic
By Domenico Cantone, Salvatore Cristofaro and Simone Faro
Published in 2006

[10]

An Efficient Algorithm for delta-Approximate-Matching with alpha-Bounded Gaps in Musical Sequences

In S.E. Nikoletseas (Ed.), Proc. of 4th International Workshop on Experimental and Efficient Algorithms (WEA 2005), Lecture Notes in Computer Science, Springer, Vol. 3503, pp. 428-439
By Domenico Cantone, Salvatore Cristofaro and Simone Faro
Published in 2005

[9]

On Tuning The (Delta,Alpha)-Sequential-Sampling Algorithm For Delta-Approximate Matching With Alpha-Bounded Gaps In Musical Sequences

In Proceedings of 6th International Conference on Music Information Retrieval, ISMIR
By Domenico Cantone, Salvatore Cristofaro and Simone Faro
Published in 2005

[8]

Solving The (Delta, Alpha)-Approximate Matching Problem Under Transposition Invariance In Musical Sequences

In Proceedings of 6th International Conference on Music Information Retrieval, ISMIR
By Domenico Cantone, Salvatore Cristofaro and Simone Faro
Published in 2005

[7]

A Space Efficient Bit-Parallel Algorithm for the Multiple String Matching Problem

In M. Simanek and J. Holub (Eds.), Proc. Of the Prague Stringology Conference '05, Czech Technical University, Prague, Czech Republic, pp. 109-124
By Domenico Cantone and Simone Faro
Published in 2005

[6]

Searching for a substring with constant extra space complexity

In P. Ferragina and R. Grossi (Eds.), Proc. Of the Third International Conference on FUN with Algorithms (FUN 2004), Edizioni Plus, University of Pisa, pp. 118-131
By Domenico Cantone and Simone Faro
Published in 2004

[5]

Two Levels Greedy: an improvement of the Dijkstra shortest path algorithm

In Proc. of Cologne-Twente Workshop on Graphs and Combinatorial Optimization (CTW 2004)
By Domenico Cantone and Simone Faro
Published in 2004

[4]

Efficient Algorithms for the delta-Approximate String Matching Problem in Musical Sequences

In M. Simanek and J. Holub (Eds.), Proc. Of the Prague Stringology Conference '04, Czech Technical University, Prague, Czech Republic, pp. 33-47
By Domenico Cantone, Salvatore Cristofaro and Simone Faro
Published in 2004

[3]

Fast-Search: a New Efficient Variant of the Boyer-Moore String Matching Algorithm

In K. Jansen, M. Margraf, M. Mastrolilli, J.D.P. Rolim (Eds.), Proc. Of Second International Workshop on Experimental Algorithms (WEA 2003), Lecture Notes in Computer Science, Springer, Vol. 2647, pp. 47-58
By Domenico Cantone and Simone Faro
Published in 2003

[2]

Forward-Fast-Search: Another Fast Variant of the Boyer-Moore String Matching Algorithm

In M. Simanek (Ed.) In Proc. of the Prague Stringology Conference '03, Czech Technical University, Prague, Czech Republic, pp. 10-24
By Domenico Cantone and Simone Faro
Published in 2003

[1]

On the Frequency of Characters in Natural Language Texts

In F. Spoto, G. Scollo, and A. Nijholt (Eds.), Proc. Of Algebraic Methods in Language Processing 2003, II AMAST Workshop On Language Processing, pp. 69-82
By Domenico Cantone and Simone Faro
Published in 2003